The number of biomedical literatures is increasing at a considerable rate, and the information is growing continuously and fast as well. Accordingly, information retrieval is more and more important to support biomedical researches. However, it often retrieves too many literatures or too few literatures for the target gene/proteins or relations. And extremely various synonyms of the gene and protein names make information retrieval more difficult to support biomedical researches. To overcome these difficulties, we propose a unified biomedical workbench with mining and probing literatures. The proposed workbench is composed of searching/collecting, literature mining, relation probing, and statistics analysis. It provides searching and collecting literatures of Pubmed articles and USPTO patents. And, to extract biomedical relations, the collected literatures are mined using text mining techniques such as named entity recognition, gene/protein name normalization, and relation extraction. Users can probe their target relations using these extracted relation information, shown in form of relation network. Finally, the workbench provides statistics information of literature meta data such as authors, organizations, publication years and so on. That is, the proposed workbench provides unified literature-based functions from searching to probing, and including text mining and statistics analysis.
KSP Keywords
Biomedical literature, Literature mining, Meta-data, Named entity Recognition, Relation Extraction, Relation network, Text mining techniques, information retrieval, statistics analysis, target gene
Copyright Policy
ETRI KSP Copyright Policy
The materials provided on this website are subject to copyrights owned by ETRI and protected by the Copyright Act. Any reproduction, modification, or distribution, in whole or in part, requires the prior explicit approval of ETRI. However, under Article 24.2 of the Copyright Act, the materials may be freely used provided the user complies with the following terms:
The materials to be used must have attached a Korea Open Government License (KOGL) Type 4 symbol, which is similar to CC-BY-NC-ND (Creative Commons Attribution Non-Commercial No Derivatives License). Users are free to use the materials only for non-commercial purposes, provided that original works are properly cited and that no alterations, modifications, or changes to such works is made. This website may contain materials for which ETRI does not hold full copyright or for which ETRI shares copyright in conjunction with other third parties. Without explicit permission, any use of such materials without KOGL indication is strictly prohibited and will constitute an infringement of the copyright of ETRI or of the relevant copyright holders.
J. Kim et. al, "Trends in Lightweight Kernel for Many core Based High-Performance Computing", Electronics and Telecommunications Trends. Vol. 32, No. 4, 2017, KOGL Type 4: Source Indication + Commercial Use Prohibition + Change Prohibition
J. Sim et.al, “the Fourth Industrial Revolution and ICT – IDX Strategy for leading the Fourth Industrial Revolution”, ETRI Insight, 2017, KOGL Type 4: Source Indication + Commercial Use Prohibition + Change Prohibition
If you have any questions or concerns about these terms of use, or if you would like to request permission to use any material on this website, please feel free to contact us
KOGL Type 4:(Source Indication + Commercial Use Prohibition+Change Prohibition)
Contact ETRI, Research Information Service Section
Privacy Policy
ETRI KSP Privacy Policy
ETRI does not collect personal information from external users who access our Knowledge Sharing Platform (KSP). Unathorized automated collection of researcher information from our platform without ETRI's consent is strictly prohibited.
[Researcher Information Disclosure] ETRI publicly shares specific researcher information related to research outcomes, including the researcher's name, department, work email, and work phone number.
※ ETRI does not share employee photographs with external users without the explicit consent of the researcher. If a researcher provides consent, their photograph may be displayed on the KSP.